Us and Them and Them: The Amazing Archaea

Image: Pompeii Worm
Hot tail, cool head. Alvinella pompejana, or the Pompeii worm, survives the highly variable temperatures of its habitat with the help of the furry coat of bacteria growing along its back.
(Photo courtesy of University of Delaware, Graduate College of Marine Studies)

Thirty years ago, if you'd ask biologists to tell you something about archaea, they'd have looked at you quite blankly. Thirty years ago, no one knew they existed. At that time, it was widely held that there were, at the most basic level, two domains of life: the eukarya - organisms like humans, that have cells with nuclei - and the bacteria (prokarya) - whose simple cells contain no nuclei.

This was the widely accepted paradigm of life in the late 1970s, when Dr. Carl Woese and his colleagues at the University of Illinois set about studying the relationships among prokaryotes using DNA sequencing - something that had never been done before. It was then that they discovered the completely distinct group of organisms that have come to be known as archaea. Since most archaea don't look different from bacteria under a microscope, new technology was key to the discovery: molecular biology made it possible to see the genetic differences that lie beneath the surface. And, genetically and biochemically, archaea are as different from bacteria as they are from hummingbirds, horses, or humans. While some archael genes have similar counterparts in bacteria, others are shared with the eukarya. A large portion of archaea genes, however, are unique, establishing them as a distinct group of organisms.

Image: The Evolutionary Tree
New kid on the block. The archaea branch of evolution wasn't added to the evolutionary tree of all of Earth's life-forms until the late 1970s. Though they resemble bacteria under a microscope, archaea are as genetically and biochemically different from bacteria as they are from hummingbirds, horses, or humans. (Phylogenetic tree graphic courtesy of Ed DeLong)

In any case, they are an interesting bunch, living in the harshest, and most bizarre environments imaginable.In the harsh category are acidic boiling pools, alkaline lakes, and salt marshes, while the bizarre includes, among others, the digestive tract of cows and termites, the mud at the bottom of the ocean floor, and oil deposits deep below the Earth.

While there are plenty of these extremists in the archael family tree, researchers have been surprised by recent findings of large "mainstream" populations in the plankton of the open sea, indicating that the archaea - creatures we didn't know existed thirty year ago - may be among the most abundant microorganisms on the planet.

Makes you wonder what other little surprises Nature has in store for us.